modeltype   =   speciationextinction
treefile   =   horse.tre
runInfoFilename   =   run_info.txt
sampleFromPriorOnly   =   0
runMCMC   =   1
loadEventData   =   0
eventDataInfile   =   event_data_in.txt
initializeModel   =   1
useGlobalSamplingProbability   =   1
globalSamplingFraction   =   1
sampleProbsFilename   =   sampling.txt
overwrite   =   1
expectedNumberOfShifts   =   1
lambdaShiftPrior   =   0
lambdaIsTimeVariablePrior   =   0
numberOfGenerations   =   20000000
mcmcOutfile   =   mcmc_out.txt
mcmcWriteFreq   =   20000
eventDataOutfile   =   event_data.txt
eventDataWriteFreq   =   20000
printFreq   =   1000
acceptanceResetFreq   =   1000
outName   =   horse
updateLambdaInitScale   =   2.0
updateLambdaShiftScale   =   0
updateMuInitScale   =   2.0
updateEventLocationScale   =   0.1
updateEventRateScale   =   4.0
updateRateEventNumber   =   0.5
updateRateEventPosition   =   0.1
updateRateEventRate   =   1
updateRateLambda0   =   1
updateRateLambdaShift   =   0
updateRateMu0   =   1
updateRateLambdaTimeMode   =   0
localGlobalMoveRatio   =   10.0
lambdaInit0   =   0.032
lambdaShift0   =   0
muInit0   =   0.01
initialNumberEvents   =   0
numberOfChains   =   2
deltaT   =   0.1
swapPeriod   =   1000
chainSwapFileName   =   chain_swap.txt
minCladeSizeForShift   =   5
segLength   =   1
extinctionProbMax   =   0.999999999
updateRatePreservationRate   =   1
updatePreservationRateScale   =   1.0
preservationRatePrior   =   1.0
preservationRateInit   =   0.43
numberOccurrences   =   1495
checkUltrametric   =   0
preservationModel   =   one_rate
observationTime = 18.6477112247675
lambdaInitPrior = 0.880833356672556
muInitPrior = 0.880833356672556
combineExtinctionAtNodes = recompute
conditionOnSurvival = 0